rmarkdown::render to compile LaTeX documents

This example LaTeX file compiles just fine for me using Rstudio, TexShop, and pdflatex example.tex . But rmarkdown::render does not work.

> rmarkdown::render("example.tex", output_format = "pdf_document")
/usr/local/bin/pandoc +RTS -K512m -RTS example.utf8.md --to latex --from markdown+autolink_bare_uris+ascii_identifiers+tex_math_single_backslash --output example.pdf --template /Library/Frameworks/R.framework/Versions/3.3/Resources/library/rmarkdown/rmd/latex/default.tex --highlight-style tango --latex-engine /Library/TeX/texbin/pdflatex --variable graphics=yes --variable 'geometry:margin=1in' 
! LaTeX Error: Can be used only in preamble.

See the LaTeX manual or LaTeX Companion for explanation.
Type  H <return>  for immediate help.
 ...                                              

l.88 documentclass

pandoc: Error producing PDF from TeX source
Error: pandoc document conversion failed with error 43
> 

Is there a way to tell rmarkdown that I'm starting with a LaTeX document? I am using

  • Mac OS 10.11.5
  • R 3.3.0
  • rmarkdown 0.9.6
  • pandoc 1.13.2
  • pdfTeX 3.14159265-2.6-1.40.17 (TeX Live 2016)

  • Never mind. tools::texi2pdf("example.tex") worked for me with Rstudio and R from the command line. The R GUI failed in error, though.

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